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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936391.1_cds_XP_016482004.1_73275
CDS Infomation

[gene=LOC107802933] [db_xref=GeneID:107802933] [protein=gamma aminobutyrate transaminase 1, mitochondrial isoform X2] [protein_id=XP_016482004.1] [location=complement(join(64986..65057,65238..65353,65434..65512,65597..65687,65961..66039,66125..66212,66292..66423,66700..66774,66861..66937,67021..67109,67198..67236,67329..67402,67692..67784,67900..67997,69070..69142,69221..69289))] [gbkey=CDS]
Sequence

ATGTTGGCACCCTTCACTGCTGGGTGGCAAAGTACTGATGTGGATCCTTTGATTATTGAG
AAGTCTGAGGGATCCTATGTCTATGACATAAAAGGGAGAAAGTATCTTGATACTCTAGCT
GGTTTGTGGTGCACAGCATTAGGGGGAAACGAGCCTCGCCTTGTTGATGCTGCCACTAAG
CAATTGAACACATTGCCCTTTTACCATTCATTTTGGAACCGTACTACAAAACCTTCTTTG
GATCTTGCGAAGGAGCTTCTGGATATGTTTACTGCAAATAAAATGGCGAAAGCATTTTTT
ACAAATAGCGGATCAGAAGCCAATGATACCCAGGTGAAGCTGGTATGGTATTACAACAAT
GCTCTTGGAAGGCCAAACAAAAAGAAATTTATTGCTCGAGCAAAAGCATATCACGGTTCA
ACTCTCATTTCTGCCAGTCTCACTGGTCTTCCTGCACTGCATCAAAAATTTGATCTTCCT
GCTCCATTTGTACTGCACACTGACTGCCCTCATTATTGGCGCTATCATCTGCCAGGTGAG
ACGGAGGAGGAGTTCTCAACCAGGTTGGCTAAAAATCTGGAAGATCTTATCCTCAAAGAG
GGGCCTGAAACAATAGCTGCTTTCATTGCTGAACCAGTCATGGGGGCAGGAGGTGTCATA
CCTCCTCCAGCAACTTATTTTGACAAGATCCAAGCTGTAGTGAAGAAATATGACCTTCTT
TTCATAGCGGATGAGGTCATCTGTGCCTTTGGGAGGCTTGGAACAATGTTTGGCTGTGAC
AAGTATAACATCAAACCCGATCTTGTCTCCCTAGCCAAGGCTCTTTCTTCTGCATATATG
CCAATTGGAGCTGTCCTTGTAAGCCCTGAAGTTTCTGATGTAATATATTCTCAAAGCAAT
AAACTTGGTTCCTTTTCTCATGGATTCACTTATTCTGGGCATCCTGTGTCGTGCGCGGTG
GCATTGGAAGCTCTTAAGATCTACAAGGAACGAAATATGGTTGAGAAAGTAAATACAATA
TCCCCAAAGTTCCAAGAAGGTCTGAAGGCGTTTTCTGACAGTCCCATAGTCGGAGAGATT
AGGGGAACTGGTTTGATCCTTGCAACGGAGTTTGCCAATAACAAATCTCCCAATGATCCT
TTCCCTCCTGAATGGGGTATTGGTACATATTTTGGAGCACAGTGTGAGAAGAATGGTATG
TTGGTACGTGTTGCTGGTGATATCATAATGATGTCTCCTCCATTTATAGTGACTCCGGAA
GAAGTTGATGAGTTGATTAGCATCTATGGGAAAGCATTAAAGGAAACTGAAAAGAGGGTG
GAAGAACTCAAGTCTCAGAAGTAA

Peptide Sequence

PEP ID

XP_016482004.1
PEP Infomation

PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial isoform X2 [Nicotiana tabacum]
Sequence

MLAPFTAGWQSTDVDPLIIEKSEGSYVYDIKGRKYLDTLAGLWCTALGGNEPRLVDAATK
QLNTLPFYHSFWNRTTKPSLDLAKELLDMFTANKMAKAFFTNSGSEANDTQVKLVWYYNN
ALGRPNKKKFIARAKAYHGSTLISASLTGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGE
TEEEFSTRLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFDKIQAVVKKYDLL
FIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEVSDVIYSQSN
KLGSFSHGFTYSGHPVSCAVALEALKIYKERNMVEKVNTISPKFQEGLKAFSDSPIVGEI
RGTGLILATEFANNKSPNDPFPPEWGIGTYFGAQCEKNGMLVRVAGDIIMMSPPFIVTPE
EVDELISIYGKALKETEKRVEELKSQK

Transcript Sequence

Gene sequence data has not been registered.